Genomic features

Investigate and compare genomic features and annotations.

ChIP-exo

Examine your ultra high resolution data to see where your TF binds chromatin.

ATAC-seq

Check out some analysis inspo for your ATAC-seq data.

CoPRO

Check out some analysis inspo for your CoPRO (or PRO-cap/PRO-seq) data.

Benzonase ChIP-exo

Check for TF-nucleosome interactions in your nuclease-fragmented ChIP-exo data.

ChIP-seq

Check and quantify where your TF binds chromatin.

MNase-seq

Look for nuclease-protected features (mostly nucleosomes).